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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949573.1_cds_XP_016490389.1_80815
CDS Infomation

[gene=LOC107810165] [db_xref=GeneID:107810165] [protein=auxin transporter-like protein 2] [protein_id=XP_016490389.1] [location=complement(join(26770..27039,27608..27865,27993..28200,29638..29735,30469..30652,30756..30868,31047..31232,31636..31794))] [gbkey=CDS]
Sequence

ATGGAATCTTCAGACAAAGTAGTAGAGACGGTAATAGTTGGAAATTATGTAGAGATGGAA
ACTGAAGGGAAATCTAAAGATGTTAAGTCAAAAATCTCTAAGTTTTTCTGGCATGGTGGT
TCTGCTTATGATGCTTGGTTTAGTTGTGCCTCTAATCAGGTAGCTCAAGTGTTATTGACG
CTGCCCTACTCATTTTCTCAACTAGGAATGATTTCTGGGATTTCATTTCAGCTCTTCTAT
GGTTTAATGGGTAGTTGGACAGCTTATCTTATTAGTATCCTCTATACTGAGTACAGAACC
AGAAAAGAAAGAGAAAAAGTCGATTTCCGCAATCATGTCATTCAGTGGTTCGAAGTTCTT
GATGGGCTACTTGGAAAACATTGGAGGAACGTGGGTTTGGCATTTAATTGCACTTTTCTT
CTGTTTGGATCCGTGATTCAACTCATTGCTTGTGCAAGCAATATATATTACATAAACGAT
AATCTGGACAAGAGAACATGGACTTATATATTTGGTGCTTGTTGTGCCACCACAGTCTTC
ATTCCTTCTTTCCACAATTATAGAATATGGTCTTTCCTTGGATTGTTGATGACCACTTTC
ACTGCTTGGTATCTTACTGTTGCATCACTACTCCATGGCCAGGTGGAGGGAGTTACGCAC
TCTGGACCAACCAAGTTGGTGCTATATTTCACAGGAGCCACAAACATTCTCTACACATTT
GGGGGACATGCTGTTACTGTGGAGGTAATGCATGCAATGTGGAAACCACAAAAGTTCAAG
GCAATTTACTTATGGGCAACACTCTATGTAATGACACTCACACTTCCATCAGCAGCAGCA
GTATATTGGGCATTTGGTGATTTTCTACTTGATCACTCCAATGCCTTCTCTCTCCTTCCA
AGAACACCCTTTAGAGACATGGCTGTCATTCTTATGCTCATTCATCAGTTTATAACATTT
GGATTTGCTTGCACTCCATTGTATTTCGTATGGGAGAAGGCCATAGGCATGCACGAGTGC
AAGAGCCTGTGCAAAAGGGCAGCGGCGAGGTTGCCGGTGGTGATTCCTATTTGGTTTCTG
GCCATTGTTTTCCCTTTCTTTGGTCCTATCAATTCAACTGTTGGATCACTTCTAGTTAGC
TTCACTGTCTACATTATCCCTGCTCTTGCTCACATGTTTACCTTCAAATCTGCTGCTGCT
CGAGAGAATGCAGTAGAGCAACCACCAAGATTTGTAGGAAGATGGGCTGGCACATTTACA
ATTAACATATTTGTAGTTGTTTGGGTATTCATTATTGGTTTTGGATTTGGTGGTTGGGCT
AGTATGCTCAATTTCATTCATCAAATTGATACATTTGGCCTTTTCACCAAGTGTTACCAA
TGCCCAATTCCTAAACAATTCCCCACCCCACCACCGCCCTACGCCGCCGCTCCACAGCCT
ACTCCGGCCAACTTCACTCACCCCCACCACCCATGA

Peptide Sequence

PEP ID

XP_016490389.1
PEP Infomation

PREDICTED: auxin transporter-like protein 2 [Nicotiana tabacum]
Sequence

MESSDKVVETVIVGNYVEMETEGKSKDVKSKISKFFWHGGSAYDAWFSCASNQVAQVLLT
LPYSFSQLGMISGISFQLFYGLMGSWTAYLISILYTEYRTRKEREKVDFRNHVIQWFEVL
DGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVF
IPSFHNYRIWSFLGLLMTTFTAWYLTVASLLHGQVEGVTHSGPTKLVLYFTGATNILYTF
GGHAVTVEVMHAMWKPQKFKAIYLWATLYVMTLTLPSAAAVYWAFGDFLLDHSNAFSLLP
RTPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRAAARLPVVIPIWFL
AIVFPFFGPINSTVGSLLVSFTVYIIPALAHMFTFKSAAARENAVEQPPRFVGRWAGTFT
INIFVVVWVFIIGFGFGGWASMLNFIHQIDTFGLFTKCYQCPIPKQFPTPPPPYAAAPQP
TPANFTHPHHP

Transcript Sequence

Gene sequence data has not been registered.